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Internet Electronic Journal of Molecular Design - IEJMD, ISSN 1538-6414, CODEN IEJMAT
ABSTRACT - Internet Electron. J. Mol. Des. February 2004, Volume 3, Number 2, 55-72

Structure of β-Artelinic Acid Clarified Using NMR Analysis, Molecular Modeling and Cyclic Voltammetry, and Comparison with α-Artelinic Acid and β-Arteether
Apurba K. Bhattacharjee, David J. Skanchy, Rickey P. Hicks, Keith A. Carvalho, Gwendolyn N. Chmurny, John R. Klose, and John P. Scovill
Internet Electron. J. Mol. Des. 2004, 3, 55-72

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Abstract:
A detailed analysis on the structure of β-artelinic acid has been performed using proton, carbon-13, 1D and 2D NMR, molecular modeling, and cyclic voltammetry methods. The results are compared by carrying out similar experiments and modeling studies with α-artelinic acid and β-arteether. Certain critical non-bonded interactions between specific protons and the ether oxygen atom in the neighborhood of the anomeric carbon atom seem to be particularly significant in the two isomers. Although the stereochemistry at the anomeric carbon atom in the sesquiterpene skeleton of these molecules is diastereomeric, the structural difference between α and β isomers and ab initio quantum chemical calculations on these compounds (using both RHF/3-21G* and RHF/6-31G** basis sets) indicate significant difference in the mode of interaction of the neighboring protons by this atom. The difference in these interactions accounts for the observed difference in NMR chemical shifts of the protons in the two isomers. The peroxide oxygen atoms in the diastereomers do not appear to be significantly affected by these protons and the intrinsic nucleophilicity of the peroxide oxygen atoms remain almost unchanged as evidenced from the calculated electrostatic potentials on these atoms and redox potentials determined by cyclic voltammetry experiments. Calculated (HF/6-31G**/NMR) chemical shift values are found to be consistent with the trends of the experimental values. The present combined NMR chemical shift assignments, molecular modeling and cyclic voltammetry study focuses the role of electronic distribution by the aromatic ring in the two isomers in relation to the protons around the anomeric carbon atom in the sesquiterpene skeleton to affect the activity of the isomers. The results should aid in the design of new artemisinin analogues with potent activity and reduced CNS toxicity.

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